MEDOC - Multi Experiment Data & Operation Center » Netdrms_9.1.1

h1. NetDrms2.4 => Netdrms 9.1.1

h2. Posgres 9.4.13

h3. Install additional modules

We need dblink for triggers between db

<pre>
root@sdo1:~# cd /usr/share/postgresql/9.4/extension
root@sdo1:/usr/share/postgresql/9.4/extension# ls -al dblink--1.1.sql
-rw-r--r-- 1 root root 5831 Aug 10 14:53 dblink--1.1.sql
</pre>

h4. ias_sdo

<pre>
root@sdo1:/usr/share/postgresql/9.4/extension# psql ias_sdo -p5432 -U postgres < dblink--1.1.sql
Use "CREATE EXTENSION dblink" to load this file.
root@sdo1:/usr/share/postgresql/9.4/extension#
root@sdo1:/usr/share/postgresql/9.4/extension#
root@sdo1:/usr/share/postgresql/9.4/extension#
root@sdo1:/usr/share/postgresql/9.4/extension# psql ias_sdo -U postgres
psql (9.4.13)
Type "help" for help.

ias_sdo=# CREATE EXTENSION dblink ;
ERROR: extension "dblink" already exists
ias_sdo=# \q
</pre>

Seems ok !

h4. ias_sdo_sums

<pre>
root@sdo1:/usr/share/postgresql/9.4/extension# psql ias_sdo_sums -p5434 -U postgres < dblink--1.1.sql
Use "CREATE EXTENSION dblink" to load this file.
root@sdo1:/usr/share/postgresql/9.4/extension# psql ias_sdo_sums -p5434 -U postgres
psql (9.4.13)
Type "help" for help.

ias_sdo_sums=# CREATE EXTENSION dblink ;
ERROR: extension "dblink" already exists
ias_sdo_sums=# \q
</pre>

Seems ok too !

h4. ias_sdo_monitor

<pre>
root@sdo1:/usr/share/postgresql/9.4/extension# psql ias_sdo_monitor -p5436 -U postgres < dblink--1.1.sql
Use "CREATE EXTENSION dblink" to load this file.
root@sdo1:/usr/share/postgresql/9.4/extension# psql ias_sdo_monitor -p5436 -U postgres
psql (9.4.13)
Type "help" for help.

ias_sdo_monitor=# CREATE EXTENSION dblink ;
ERROR: extension "dblink" already exists
</pre>

Ok too!

h3. Ingest last dumps from sdo1

<pre>
postgres@sdo1:~/dumps$ gunzip < ias_sdo_sums_2017-09-28.gz | psql ias_sdo_sums -p5434 -U postgres

postgres@sdo1:~/dumps$ gunzip < ias_sdo_2017-09-28.gz | psql ias_sdo -p5432 -U postgres

postgres@sdo1:~/dumps$ gunzip < ias_sdo_monitor_2017-09-28.gz | psql ias_sdo_monitor -p5436 -U postgres
</pre>

h3. Creation of missing tables & functions

TABLE drms.ingested_sunums

--When a client ingests a Slony log, each SUNUM of each data series record is copied
-- into this table. The client can use this table of SUNUMs to prefetch SUs from the
-- providing site. This SQL is ingested as the pg_user database user, the same
-- user that will be ingesting Slony logs and prefetching SUs, so permissions on
-- this table will be correct without having to execute a GRANT statement.
--
-- The namespace drms is required, and is created by NetDRMS.sql during the
-- NetDRMS installation process.
--

<pre>
DROP TABLE IF EXISTS drms.ingested_sunums;
CREATE TABLE drms.ingested_sunums (sunum bigint PRIMARY KEY, starttime timestamp with time zone NOT NULL);
CREATE INDEX ingested_sunums_starttime ON drms.ingested_sunums(starttime);
</pre>

FUNCTION drms.capturesunum
--
-- For each table under replication, a trigger is created that calls this function, which
-- then copies SUNUMs into the underlying table, drms.ingested_sunums.
--
-- drms.ingested_sunums may not exist (older NetDRMSs did not receive the SQL to create
-- this table). If this table does not exist, then this function is a no-op.
--

<pre>
CREATE OR REPLACE FUNCTION drms.capturesunum() RETURNS TRIGGER AS
$capturesunumtrig$
BEGIN
IF EXISTS (SELECT n.nspname, c.relname FROM pg_class c JOIN pg_namespace n ON n.oid = c.relnamespace WHERE n.nspname = 'drms' AND c.relname = 'ingested_sunums') THEN
IF (TG_OP='INSERT' AND new.sunum > 0) THEN
IF EXISTS (SELECT 1 FROM drms.ingested_sunums WHERE sunum = new.sunum) THEN
RETURN NULL;
END IF;
INSERT INTO drms.ingested_sunums (sunum, starttime) VALUES (new.sunum, clock_timestamp());
END IF;
END IF;

RETURN NEW;
END
$capturesunumtrig$ LANGUAGE plpgsql;
</pre>

Add a trigger on every hmi table like this to use the function:

<pre>
CREATE TRIGGER capturesunumtrig AFTER INSERT ON hmi.bharp_720s FOR EACH ROW EXECUTE PROCEDURE drms.capturesunum();
</pre>

NOT for aia.lev1 series because we are taking 1/5 data we don't want everything

h3. Create shadow & speed up the usage of aia.lev1 table

h4. postgresql-plperl

In order to run createshadow we need postgresql-plperl

<pre>
apt-get install postgresql-plperl
</pre>

h4. Install language plperl

Install plperl within postgres

<pre>
createlang -p5432 -U postgres plperlu ias_sdo
</pre>

h4. Create function updateshadow()

Create function updateshadow()

<pre>
psql ias_sdo -p5432 -f /usr/local/netdrms_current/base/drms/libs/pg/updateshadow.sql
</pre>

So now we are able to launch createshadow()

<pre>
createshadow series=aia.lev1
</pre>

h3. Get data from JSOC

h4. Create readonly user

<pre>
production@sdo1:/usr/local/netdrms_current$ psql ias_sdo_sums -p5434 -U postgres
psql (9.4.13)
Type "help" for help.

ias_sdo_sums=# CREATE USER readonlyuser;
CREATE ROLE
ias_sdo_sums=# GRANT CONNECT ON DATABASE ias_sdo_sums To readonlyuser ;
GRANT

</pre>

h2. Installation Netdrms_9.1.1

h3. Create netdrms directory

Create the directory to untar netdrms_9.1.1 from http://jsoc.stanford.edu/~arta/for-pablo/netdrms-9.1.1.tar.gz

<pre>
mkdir /usr/local/netdrms_9.1.1
</pre>

Change owner for production:ias

<pre>
chown -R production:ias netdrms_9.1.1
</pre>

h3. Configuration file

<pre>
cp config.local.template config.local
</pre>

Warning : Config has done for remote sum, indeed jmd is not used anymore

h3. Modification file 'configure'

In file /usr/local/netdrms_current/configure

Replace all " $? !=0 " by " $status !=0 " in file configure then tape

see https://git.ias.u-psud.fr/palinger/netdrms_9.1.1/commit/0fb3fa60d2b6124500739087c8edeaba91559449

h3. Modiffication file jsoc_machine.csh

In file /usr/local/netdrms_current/build/jsoc_machine.csh (Same issue in NetDrms 8.11 , NetDrms 9.0)

ligne 28 :

<pre>
case "x86_64":
echo linux_x86_64
breaksw
</pre>

see https://git.ias.u-psud.fr/palinger/netdrms_9.1.1/commit/e75212b1bc8ab493ae15ef3f8b50ebfbad065bc8

h3. File make_basic.mk

In file make_basic.mk line 223

look for "GCC_LF_ALL ="
add "-lcrypto"

h3. Execution configure

<pre>
./configure
</pre>

h2. Build

As we are going to use new remote sums (written in python)
we only need to do the following

<pre>
make show_info
make show_series
</pre>

Checking the modif on Db from NetDrms 2.4 we have figured out that some index where added
The other modif are for sum_rm use ...
Not needed at IAS

On sdo and sdo3 modification in the DB ( index addition)

<pre>
production@sdo:~$ psql ias_sdo_sums -p5434
ias_sdo_sums=# CREATE INDEX sum_partn_alloc_wd_idx ON public.sum_partn_alloc(wd) ;
</pre>

h2. Start NetDrms



h3. Launch sums.py

<pre>
sumsd.py sums.py --loglevel=debug &
</pre>



h3. Launch rsumsd-.py

<pre>
rsumsd.py --loglevel=debug &
</pre>

h3. Launch rsums-clientd.py

<pre>
rsums-clientd.py --loglevel=debug &
</pre>

h2. Stop NetDrms

h3. list processes and their pid

<pre>
ps aux | grep python
</pre>

h3. Stop rsums-clientd.py

<pre>
kill -2 #rsums-clientd.py_pid
</pre>

h3. Stop rsumsd-.py

<pre>
kill -2 #rsumsd.py _pid
</pre>

h3. Stop sums.py

<pre>
kill -2 #sums.py_pid
</pre>

h1. NetDrms 9.1.1 FAQ

h2. rsumsd.py keep crashing

Error message :
If you 've got sthg like in rslog_20171204.txt (for exemple)
<pre>
2017-12-04 14:35:56 - DEBUG - rsumsd.py:423 - Exiting TerminationHandler.
2017-12-04 14:35:56 - ERROR - rsumsd.py:441 - (get) No SU-table record exists for SU 995061214.
2017-12-04 14:35:56 - INFO - rsumsd.py:429 - Exiting with return status 15.
</pre>

Workaround :

1) Delete from ingested_sunums table
ias_sdo=# select * from drms.ingested_sunums where sunum=995061214;
sunum | starttime
-----------+-------------------------------
995061214 | 2017-11-30 18:02:18.085994+01
(1 row)

ias_sdo=# delete from drms.ingested_sunums where sunum=995061214;
DELETE 1

2)Delete from rs.requests

<pre>
ias_sdo=# select * from drms.rs_requests where sunums like '%995061214%' ;
ias_sdo=# delete from drms.rs_requests where sunums like '%995061214%' ;
DELETE 132
</pre>

3) Restart daemons sumsd.py , rsumsd.py, rsums-clientd.py as production

<pre>
sumsd.py &
rsums.py &
rsums-clientd.py &

</pre>