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/*******************************************************************************
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* Copyright 2010-2013 CNES - CENTRE NATIONAL d'ETUDES SPATIALES
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*
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* This file is part of SITools2.
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*
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* SITools2 is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* SITools2 is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with SITools2. If not, see <http://www.gnu.org/licenses/>.
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******************************************************************************/
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package fr.cnes.sitools.astro.vo.sia;
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import fr.cnes.sitools.dataset.DataSetApplication;
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import fr.cnes.sitools.dataset.dto.ColumnConceptMappingDTO;
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import fr.cnes.sitools.dictionary.model.Concept;
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import fr.cnes.sitools.extensions.common.InputsValidation;
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import fr.cnes.sitools.extensions.common.NotNullAndNotEmptyValidation;
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import fr.cnes.sitools.extensions.common.NumberArrayValidation;
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import fr.cnes.sitools.extensions.common.SpatialGeoValidation;
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import fr.cnes.sitools.extensions.common.StatusValidation;
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import fr.cnes.sitools.extensions.common.Validation;
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import fr.cnes.sitools.plugins.resources.model.ResourceModel;
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import fr.cnes.sitools.util.Util;
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import java.math.BigInteger;
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import java.util.ArrayList;
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import java.util.Collections;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import java.util.logging.Level;
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import java.util.logging.Logger;
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import net.ivoa.xml.votable.v1.AnyTEXT;
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import net.ivoa.xml.votable.v1.DataType;
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import net.ivoa.xml.votable.v1.Field;
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import net.ivoa.xml.votable.v1.Info;
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import net.ivoa.xml.votable.v1.Option;
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import net.ivoa.xml.votable.v1.Param;
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import net.ivoa.xml.votable.v1.Values;
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import org.restlet.Context;
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import org.restlet.Request;
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/**
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* Input parameters for SIA.
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*
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* @author Jean-Crhistophe Malapert <jean-christophe.malapert@cnes.fr>
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*/
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import fr.cnes.sitools.common.exception.SitoolsException;
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import fr.cnes.sitools.dataset.dto.DictionaryMappingDTO;
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public class SimpleImageAccessInputParameters implements DataModelInterface {
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/**
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* Logger.
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*/
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private static final Logger LOG = Logger.getLogger(SimpleImageAccessInputParameters.class.getName());
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/**
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* Init value for right ascension parameter of the user input.
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*/
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private transient double ra = 0.0;
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/**
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* Init value for declination parameter of the user input.
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*/
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private transient double dec = 0.0;
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/**
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* Array that stores the size parameter of the user input.
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*/
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private transient double[] size;
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/**
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* Default value for the verb parameter of the user input.
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*/
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private transient int verb = 0;
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/**
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* Data model that stores the metadata response of the service.
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*/
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private final transient Map dataModel = new HashMap();
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/**
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* Request.
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*/
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private final transient Request request;
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/**
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* Context.
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*/
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private final transient Context context;
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/**
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* Application where this resources is linked.
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*/
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private final transient DataSetApplication datasetApp;
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/**
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* Configuration parameters of this resource.
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*/
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private final transient ResourceModel resourceModel;
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/**
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* Constructs the objet that returns the metadata of the service.
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* @param datasetAppVal application
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* @param requestVal request
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* @param contextVal context
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* @param resourceModelVal configuration parameters
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*/
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public SimpleImageAccessInputParameters(final DataSetApplication datasetAppVal, final Request requestVal, final Context contextVal, final ResourceModel resourceModelVal) {
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this.datasetApp = datasetAppVal;
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this.context = contextVal;
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this.request = requestVal;
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this.resourceModel = resourceModelVal;
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final String posInput = this.request.getResourceRef().getQueryAsForm().getFirstValue(SimpleImageAccessProtocolLibrary.POS);
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final String sizeInput = this.request.getResourceRef().getQueryAsForm().getFirstValue(SimpleImageAccessProtocolLibrary.SIZE);
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final String format = this.request.getResourceRef().getQueryAsForm().getFirstValue(SimpleImageAccessProtocolLibrary.FORMAT);
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final String intersect = this.request.getResourceRef().getQueryAsForm().getFirstValue(SimpleImageAccessProtocolLibrary.INTERSECT);
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final String verbosity = this.request.getResourceRef().getQueryAsForm().getFirstValue(SimpleImageAccessProtocolLibrary.VERB);
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//TODO check the differentParameters
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if(posInput == null && sizeInput == null){
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Info info = new Info();
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info.setName("QUERY_STATUS");
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info.setValueAttribute("ERROR");
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final List<Info> listInfos = new ArrayList<Info>();
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listInfos.add(info);
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this.dataModel.put("infos", listInfos);
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if(format.equalsIgnoreCase("METADATA")){
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fillMetadataFormat();
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}
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}else{
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if (Util.isSet(format) && format.equals(SimpleImageAccessProtocolLibrary.ParamStandardFormat.METADATA.name())) {
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fillMetadataFormat();
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} else {
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checkInputParameters(posInput, sizeInput);
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}
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}
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}
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/**
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* Fills metadata response.
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*/
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private void fillMetadataFormat() {
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this.dataModel.put("description", this.resourceModel.getParameterByName(SimpleImageAccessProtocolLibrary.DESCRIPTION).getValue());
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final Info info = new Info();
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info.setName("QUERY_STATUS");
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info.setValueAttribute("OK");
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final List<Info> listInfos = new ArrayList<Info>();
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listInfos.add(info);
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this.dataModel.put("infos", listInfos);
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final List<Param> listParam = new ArrayList<Param>();
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Param param = new Param();
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param.setName("INPUT:POS");
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param.setValue("0,0");
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param.setDatatype(DataType.DOUBLE);
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AnyTEXT anyText = new AnyTEXT();
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anyText.getContent().add("Search Position in the form ra,dec where ra and dec are given in decimal degrees in the ICRS coordinate system.");
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param.setDESCRIPTION(anyText);
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listParam.add(param);
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param = new Param();
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param.setName("INPUT:SIZE");
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param.setValue("0.05");
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param.setDatatype(DataType.DOUBLE);
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anyText = new AnyTEXT();
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anyText.getContent().add("Size of search region in the RA and Dec directions.");
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param.setDESCRIPTION(anyText);
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listParam.add(param);
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param = new Param();
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param.setName("INPUT:FORMAT");
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param.setValue(SimpleImageAccessProtocolLibrary.ParamStandardFormat.ALL.name());
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param.setDatatype(DataType.CHAR);
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param.setArraysize("*");
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anyText = new AnyTEXT();
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anyText.getContent().add("Requested format of images.");
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param.setDESCRIPTION(anyText);
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final List<String> formatList = SimpleImageAccessProtocolLibrary.ParamStandardFormat.getCtes();
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final Values values = new Values();
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for (String formatIter : formatList) {
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final Option option = new Option();
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option.setValue(formatIter);
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values.getOPTION().add(option);
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}
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param.setVALUES(values);
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//TODO : le faire pour chaque format
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listParam.add(param);
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param = new Param();
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param.setName("INPUT:INTERSECT");
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param.setValue(this.resourceModel.getParameterByName(SimpleImageAccessProtocolLibrary.INTERSECT).getValue());
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param.setDatatype(DataType.CHAR);
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anyText = new AnyTEXT();
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anyText.getContent().add("Choice of overlap with requested region.");
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param.setDESCRIPTION(anyText);
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listParam.add(param);
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param = new Param();
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param.setName("INPUT:VERB");
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param.setValue(this.resourceModel.getParameterByName(SimpleImageAccessProtocolLibrary.VERB).getValue());
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param.setDatatype(DataType.INT);
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anyText = new AnyTEXT();
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anyText.getContent().add("Verbosity level, controlling the number of columns returned.");
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param.setDESCRIPTION(anyText);
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listParam.add(param);
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dataModel.put("params", listParam);
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//******************************************************************************************************************
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//******************************************************************************************************************
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//******************************************************************************************************************
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String dictionaryName = resourceModel.getParameterByName(SimpleImageAccessProtocolLibrary.DICTIONARY).getValue();
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final List<String> columnList = new ArrayList<String>();
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List<Field> fieldList = new ArrayList<Field>();
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try {
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List<ColumnConceptMappingDTO> mappingList = getDicoFromConfiguration(datasetApp, dictionaryName);
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setFields(fieldList, columnList, mappingList);
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}catch (SitoolsException ex) {
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}
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}
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/**
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* Checks input parameters.
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* @param posInput input parameter for POS
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* @param sizeInput input parameter for SIZE
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*/
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private void checkInputParameters(final String posInput, final String sizeInput) {
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final List<Info> infos = new ArrayList<Info>();
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final Map<String, String> validationMap = new HashMap<String, String>();
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validationMap.put(SimpleImageAccessProtocolLibrary.POS, posInput);
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validationMap.put(SimpleImageAccessProtocolLibrary.SIZE, sizeInput);
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Validation validation = new InputsValidation(validationMap);
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validation = new NotNullAndNotEmptyValidation(validation, SimpleImageAccessProtocolLibrary.POS);
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validation = new NotNullAndNotEmptyValidation(validation, SimpleImageAccessProtocolLibrary.SIZE);
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if(validation.validate().isValid()){
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validation = new SpatialGeoValidation(validation, SimpleImageAccessProtocolLibrary.POS, 0, 1, new double[]{0.0, 360.0}, new double[]{-90.0, 90.0});
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// LA LIGNE SUIVANTE A ETE AJOUTEE POUR VERIFIER QUE LA SIZE EST BIEN UN ARRAY DE NOMBRE
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validation = new NumberArrayValidation(validation, SimpleImageAccessProtocolLibrary.SIZE, ",", 1, 2);
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//-----------------------------------------------------------------------------------------------
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}
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StatusValidation status = validation.validate();
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if (status.isValid()) {
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final String pos = validation.getMap().get(SimpleImageAccessProtocolLibrary.POS);
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final String[] arrayPos = pos.split(",");
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this.ra = Double.valueOf(arrayPos[0]);
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this.dec = Double.valueOf(arrayPos[1]);
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final String size = validation.getMap().get(SimpleImageAccessProtocolLibrary.SIZE);
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final String[] arraySize = size.split(",");
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if(arraySize.length == 1) {
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this.size = new double[1];
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this.size[0] = Double.valueOf(arraySize[0]);
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} else {
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this.size = new double[2];
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this.size[0] = Double.valueOf(arraySize[0]);
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this.size[1] = Double.valueOf(arraySize[1]);
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}
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} else {
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Info info = new Info();
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info.setName("QUERY_STATUS");
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info.setValueAttribute("ERROR");
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infos.add(info);
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final Map<String, String> errors = status.getMessages();
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final Set<Map.Entry<String, String>> entries = errors.entrySet();
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for (Map.Entry<String, String> entry : entries) {
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info = new Info();
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info.setID(entry.getKey());
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info.setName("Error in " + entry.getKey());
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info.setValueAttribute("Error in input " + entry.getKey() + ": " + entry.getValue());
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infos.add(info);
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LOG.log(Level.FINEST, "{0}: {1}", new Object[]{entry.getKey(), entry.getValue()});
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}
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}
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if (!infos.isEmpty()) {
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this.dataModel.put("infos", infos);
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}
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}
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@Override
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public final Map getDataModel() {
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return Collections.unmodifiableMap(this.dataModel);
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}
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/**
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* Get Ra.
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*
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* @return Ra
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*/
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public final double getRa() {
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return this.ra;
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}
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/**
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* Get Dec.
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*
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* @return Dec
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*/
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public final double getDec() {
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return this.dec;
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}
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/**
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* Get Sr.
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*
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* @return Sr
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*/
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public final double[] getSize() {
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final double[] copySize = new double[this.size.length];
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System.arraycopy(this.size, 0, copySize, 0, this.size.length);
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return copySize;
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}
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/**
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* Get the request.
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*
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* @return Request
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*/
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public final Request getRequest() {
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return this.request;
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}
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/**
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* Get the context.
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*
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* @return Context
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*/
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public final Context getContext() {
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return this.context;
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}
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/**
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* Get DatasetApplication.
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*
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* @return Dataset application
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*/
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public final DataSetApplication getDatasetApplication() {
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return this.datasetApp;
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}
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/**
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* Get verb.
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* @return verb
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*/
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public final int getVerb() {
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return this.verb;
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}
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//----------------------------------------------------------------------------
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//----------------------------------------------------------------------------
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//----------------------------------------------------------------------------
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/**
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* Set Fields and columnSqlAliasList.
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*
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* @param fieldList List of fields to display on the VOTable
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* @param columnList List of SQL column
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* @param mappingList List of SQL column/concept
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*/
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private void setFields(final List<Field> fieldList, final List<String> columnList, final List<ColumnConceptMappingDTO> mappingList) {
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for (ColumnConceptMappingDTO mappingIter : mappingList) {
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String id = null;
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String name = null;
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String ucd = null;
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String utype = null;
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String ref = null;
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String datatype = null;
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String width = null;
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String precision = null;
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String unit = null;
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String type = null;
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String xtype = null;
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String arraysize = null;
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String descriptionValue = null;
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columnList.add(mappingIter.getColumnAlias());
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final Concept concept = mappingIter.getConcept();
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if (concept.getName() != null) {
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name = concept.getName();
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}
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if (concept.getPropertyFromName("ID").getValue() != null) {
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id = concept.getPropertyFromName("ID").getValue();
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}
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if (concept.getPropertyFromName("ucd").getValue() != null) {
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ucd = concept.getPropertyFromName("ucd").getValue();
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}
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if (concept.getPropertyFromName("utype").getValue() != null) {
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utype = concept.getPropertyFromName("utype").getValue();
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}
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if (concept.getPropertyFromName("ref").getValue() != null) {
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ref = concept.getPropertyFromName("ref").getValue();
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}
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if (concept.getPropertyFromName("datatype").getValue() != null) {
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datatype = concept.getPropertyFromName("datatype").getValue();
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}
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if (concept.getPropertyFromName("width").getValue() != null) {
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width = concept.getPropertyFromName("width").getValue();
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}
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if (concept.getPropertyFromName("precision").getValue() != null) {
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precision = concept.getPropertyFromName("precision").getValue();
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}
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|
405 |
if (concept.getPropertyFromName("unit").getValue() != null) {
|
|
406 |
unit = concept.getPropertyFromName("unit").getValue();
|
|
407 |
}
|
|
408 |
if (concept.getPropertyFromName("type").getValue() != null) {
|
|
409 |
type = concept.getPropertyFromName("type").getValue();
|
|
410 |
}
|
|
411 |
if (concept.getPropertyFromName("xtype").getValue() != null) {
|
|
412 |
xtype = concept.getPropertyFromName("xtype").getValue();
|
|
413 |
}
|
|
414 |
if (concept.getPropertyFromName("arraysize").getValue() != null) {
|
|
415 |
arraysize = concept.getPropertyFromName("arraysize").getValue();
|
|
416 |
}
|
|
417 |
if (concept.getDescription() != null) {
|
|
418 |
descriptionValue = concept.getDescription();
|
|
419 |
}
|
|
420 |
final Field field = new Field();
|
|
421 |
field.setID(id);
|
|
422 |
field.setName(name);
|
|
423 |
field.setUcd(ucd);
|
|
424 |
field.setUtype(utype);
|
|
425 |
field.setRef(ref);
|
|
426 |
field.setDatatype(DataType.fromValue(datatype));
|
|
427 |
if (width != null) {
|
|
428 |
field.setWidth(BigInteger.valueOf(Long.valueOf(width)));
|
|
429 |
}
|
|
430 |
field.setPrecision(precision);
|
|
431 |
field.setUnit(unit);
|
|
432 |
field.setType(type);
|
|
433 |
field.setXtype(xtype);
|
|
434 |
field.setArraysize(arraysize);
|
|
435 |
final AnyTEXT anyText = new AnyTEXT();
|
|
436 |
anyText.getContent().add(descriptionValue);
|
|
437 |
field.setDESCRIPTION(anyText);
|
|
438 |
fieldList.add(field);
|
|
439 |
}
|
|
440 |
dataModel.put("fields", fieldList);
|
|
441 |
}
|
|
442 |
|
|
443 |
/**
|
|
444 |
* Provide the mapping between SQL column/concept for a given dictionary.
|
|
445 |
*
|
|
446 |
* @param datasetApp Application where this service is attached
|
|
447 |
* @param dicoToFind Dictionary name to find
|
|
448 |
* @return Returns a mapping SQL column/Concept
|
|
449 |
* @throws SitoolsException No mapping has been done or cannot find the dico
|
|
450 |
*/
|
|
451 |
protected List<ColumnConceptMappingDTO> getDicoFromConfiguration(final DataSetApplication datasetApp,
|
|
452 |
final String dicoToFind) throws SitoolsException {
|
|
453 |
List<ColumnConceptMappingDTO> colConceptMappingDTOList = null;
|
|
454 |
|
|
455 |
// Get the list of dictionnaries related to the datasetApplication
|
|
456 |
final List<DictionaryMappingDTO> dicoMappingList = datasetApp.getDictionaryMappings();
|
|
457 |
if (!Util.isSet(dicoMappingList) || dicoMappingList.isEmpty()) {
|
|
458 |
throw new SitoolsException("No mapping with VO concepts has been done. please contact the administrator");
|
|
459 |
}
|
|
460 |
|
|
461 |
// For each dictionary, find the interesting one and return the mapping SQLcolumn/concept
|
|
462 |
for (DictionaryMappingDTO dicoMappingIter : dicoMappingList) {
|
|
463 |
final String dicoName = dicoMappingIter.getDictionaryName();
|
|
464 |
if (dicoToFind.equals(dicoName)) {
|
|
465 |
colConceptMappingDTOList = dicoMappingIter.getMapping();
|
|
466 |
break;
|
|
467 |
}
|
|
468 |
}
|
|
469 |
return colConceptMappingDTOList;
|
|
470 |
}
|
|
471 |
|
|
472 |
|
|
473 |
|
|
474 |
}
|
adding vo protocol (SIA and Cone Search) dev